Somehow I damaged the file which contains the installed cydia apps on my iphone
File path: /var/lib/dpkg/status
I tried to recover it on my own way. This steps may take long but anyhow it worked for me!

In the File you will have to enter the packages as this example:

Package: x
Status: install ok installed
Version: x
Pre-Depends: x
Depends: x
Conflicts: y
Replaces: x
Installed-Size: 1

For cydia for example:

Package: cydia
Status: install ok installed
Version: 1.0.3044-65
Installed-Size: 1448
Pre-Depends: dpkg (>= 1.14.25-8)
Depends: apr-lib, apt7-key, apt7-lib, darwintools, pcre, shell-cmds, system-cmds, essential
Conflicts: com.sosiphone.addcydia
Replaces: com.sosiphone.addcydia

The fields mentioned above are the only (till now) required fields, ignore all others like maintainer, description, etc.

To know which packages you already installed browse to /var/lib/dpkg/info and grab all *.list names
for the example mentioned above, you would find a file called cydia.list

get required infos of packages from iphone:

/var/lib/apt/lists/ *Packages

or  from internet:
Here are infos about the fields from some repos:
(found by searching google : "Package: package-name" and don't forget "quotation marks"

http://modmyi.com/cydia/search.php

http://apt.saurik.com/dists/tangelo-3.7/main/binary-iphoneos-arm/Packages
http://apt.modmyi.com/dists/stable/main/binary-iphoneos-arm/Packages
http://apt.bigboss.us.com/repofiles/cydia/dists/stable/main/binary-iphoneos-arm/Packages
http://iphone.tgbus.com/cydia/Packages
http://repo.beyouriphone.com/Packages

Batch Script placed in the folder of status with info foldercontaining *.list is inside
This will restore all to new file status-append
then just copy and paste to status, open cydia and correct version, dependencies, etc.

@echo off
Title Restore Installed Apps
ECHO.
ECho append *.list to status
ECHO.
for /f %%i in ('dir /b info\*.list') DO (
    CALL :schonda %%~ni
)
ECHO.
ECHO Done!
pause
exit

:schonda
SET F=status-append
FIND "Package: %1" "status"
IF NOT %ERRORLEVEL%==0 (
    ECHO     [%1]    [Missing!]
    >>%F% ECHO.
    >>%F% ECHO Package: %1
    >>%F% ECHO Status: install ok installed
    >>%F% ECHO Version: 1
    REM >>%F% ECHO Pre-Depends: x
    REM >>%F% ECHO Depends: x
    REM >>%F% ECHO Conflicts: y
    REM >>%F% ECHO Replaces: x
    REM >>%F% ECHO Installed-Size: 1
    ) ELSE (
        ECHO     [%1]    [OK]
    )
GOTO :EOF

App

iTunes

Version

Rating

Price

Cam Info

Geotag

Date Taken

Resolution

Size

Privacy Settings

Batch Upload

Retrieve user Elements

Predifined Elements

Link

Flickr

1.0.1

60%

Free

Reduced

Current Location

Upload Date

Original

Double!

Sets and Tags

Flickit

1.2.1

70%

Free

Reduced

Upload Date

Original

Reduced Quality

Tags an Sets

All

flickr sendr

2.0.2

30%

Free

Current Location

Upload Date

Original

Double!

Mail (Share)

3.1

70%

Free

Original

Original

Original

800 x 600

Reduced Quality

Tags only

Mail (Copy Paste)

3.1

90%

Free

Original

Original

Original

Original

Original

Tags only

Original Image: Comparison Set:

Conclusion:The best iPhone Flickr Upload App is the Mail App using the Copy and Paste Function! (How to use Mail App here)

Reason: Due to Apple OS restrictions, all Third-Party Apps are not allowed to have full access on Files, that means, any third-party App doesn't have permission to read the Date Taken info or Geotag info, even the original File size the picture taken with can't be retrieved.

Goodbye to all Third-party Flickr Uploaders!!

Hint: To use the Mail App, you have to setup up a Flickr E-mail Adress here

For further Settings like privacy settings and predifined tags see this and this

List of my Favourite iPhone Apps:

JB Apps:

APP	Description	Source	iOS 7	Rating
Accelerate	enable faster transitions	bigboss
Activator	Custom Gestures for custom Actions	bigboss
afc2add	Access System Files with Data cable connected	modmyi
AnyAttach	Attach any File extensions to Mail App	insanelyi
AppAddict	Another AppStore	insanelyi
AppInfo	Export List of all installed Apps and Tweaks	bigboss
AppStore Update Size	Displays Download Size for Updates	bigboss
AppSync	Syncs unsigned Apps with iTunes
Audio Recorder	Record Phone Calls	meisterdon
Browser Changer	Changes Default Browser	bigboss
Copic	Display Contact Pictures inside Phonebook, Mail, Messages, WhatsApp, ..	bigboss
FullForce	Maximize Size of Apps on larger Displays	insanelyi
iFile	Finder for iOS	insanelyi
IPA Installer	Install IPAs directly from device	insanelyi
LocationFaker	fake GPS location	insanlyi
LockInfo	Display Calendar, Mails, custom Notifications on Lockscreen	modmyi
Mail Enhancer Pro	E-Mail Filters and more	insanelyi
MobileTerminal	Terminal for iOS	bigboss
NCSettings	Access smart Controls within Notification Center for WiFi, 3G, GPS, LED, Volume, Brightness,..	modmyi
NetworkList	view saved WiFi Passwords in Settings	bigboss
Photo Info	view EXIF, GPS Data form Photos App	bigboss
Prime	Custom Colors for Incoming and Outgoing Calls in Call History	modmyi
Save-Game Tool	Hack saved game data	insanelyi
Show My Touch	Display color field where finger is pressed	bigboss
SMS Timestamps	as the name says	bigboss
SMSCounter	Counts sent/received Messages	bigboss
SwipeSelection	swype over keys moves cursor	bigboss
Toggle SSH	SSH Toggler	bigboss
Torch	LED Light access from Lockscreen	modmyi
WiFi Analyzer	Detect all WiFi Networks around you	insanelyi
Terminal Tweaks
adv-cmds	finger, fingerd, last, lsvfs,  md, ps	saurik
Erica Utilities	additional command line commands	modmyi
file-cmds	chflags, compress, ipcrm, ipcs, pax	saurik
Find Utilites	search File System	saurik
Gawk	awk	saurik
grep	grep	saurik
network-cmds	arp, ifconfig, netstat, route, traceroute	saurik
Python	programming language	saurik
sed	sed	saurik
shell-cmds	killall, mktemp, renice, time, which	saurik
Sudo	sudo	saurik
system-cmds	iostat, login, passwd, sync, sysctl	saurik
Vi IMproved	vim	saurik
wget	wget	saurik

Sources:

Important Files for Backup:

_____________________
afc2add
AppSync Mobile Inst. Patch replacement for 3.1 Syncs IPAs with iTunes 
AttachmentSaver
Celeste Bluetooth File Sharing (from insanelyi)
ConfirmSMS
Copic (Turn off for SMS)
Covert (Private Browsing for Safari)
Cydelete
Cydia Installer
Cyntact Shows Thumbnails beside Contacts
Data Counter
Emoji Toggle
Find In Page2
Flashlight
Forward Msg Fix iPhone-notes
Hide n Seek 
iFile File Explorer with advanced options (From sinfuliphone)
Installous
iPhoneDelivery
Lock Calendar
MobileTerminal
OpenSSH
OpenSSL
PasswordPilot
PrivaCy
SMS+
Safari Download Plug-In
Safari Upload Enabler
SBSettings
SBS Themes: Apple Congruency
SBS Toggles: AutoCorrection, AutoLock 
Wifi, iPod, NoRotation, Brightness, Phone, Processes, EDGE, 3G, Location, Vibrate, SSH, PushMail, Push Notification AutoLock, FastNotes, Bluetooth, Keep Awake, Vibrate(VideoToggle (http://cy.sosiphone.com/) for 3G)
KillBackground
SMS Helper
 SysInfoPlus
uRemote
User Agent Faker
YourTube 2    Adds Download Support to native YouTube app
YoutubeToMp3



3G Unrestrictor
iStreamnet
MemTool
Orca Contacts Updater
Tab+
UnlimTones
Wi-Fi Sync 

Categories Puts ur apps in categories
 

Sources:

http://cydia.hackulo.us/ (Includes AppSync and Installous)
http://cydia.xsellize.com/
http://sinfuliphonerepo.com/
http://repo.insanelyi.com
http://repo.beyouriphone.com/
http://theiphonespotrepo.net/apt/
http://vnmagic.net/cydia/
http://cydia.iphonecake.com/
http://iphonedelivery .advinux.com/cydia/
http://filippobiga.me/repo
http://apps.iphoneislam.com
http://repo.woowiz.net
http://apt.modmyi.com
http://rpetri.ch/repo
http://cydia.zodttd.com/repo/cydia

http://cydia.freemap.co.il/
http://apt.saurik.com/cydia-3.7/
http://apt.geohot.com/
http://iromrepo.com/Cydia/gba/
http://apt.pwncenter.com
http://cydia.touch-mania.com
http://xsellize.com/cydia/youtube789-youtube
http://repo.sinfuliphone.com

http://cydia.iclarified.com/
http://apt.iphone-storage.de/
http://ispaziorepository.com/
http://apt.modmyi.com/
http://cydia.zodttd.com/repo/cydia (Good Themes)
 

http://intelliborn.com/cydia/
http://nickplee.com/cydiasource/
http://apt9.yellowsn0w.com
http://apt.bigboss.us.com/repofiles/cydia/
http://db.easywakeup.net/repo/
http://iphone.hackndev.org/apt/
http://apt.hackers.nl
http://hackthatifone.com/htif/apt/
http://cydia.iclarified.com



http://d.imobilecinema.com
http://iphone.freecoder.org/apt
http://apps.iphoneislam.com

http://cydia.ispazio.net
http://cydia.i-apps.pl
http://apt.modmyi.com
http://ranbee.com/repo/
http://cy.sosiphone.com
http://repo.smxy.org/cydia/apt
http://apt.saurik.com
http://apt.pwncenter.com
http://cydia.zodttd.com/repo/cydia



http://iphone.org.hk/apt/ Mobile Installation Patch for IPAs

 

Free AppStore Apps:

AL-MAWRID
Analytics (Google Analytics)
AppSender
barcoo
Blitzer.de
Byline
CloudBrowse
CodiceFiscale
Currency
DB Navigator
dict.cc
DomainTools
Dropbox
ebay
Facebook
Fax.de
Flashlight
Fring
Geizhals
GMX Mail
GMX SMS
Google Earth
Google+
Handy Ticket
HDR
iHandy Level
iLiga
Keeper (Password Safe)
Mein o2
Meine Bank
Messenger
Midomi Ultra
MobileVOIP
Multi dict.
offen?
Opera Mini
PayPal
Ping Chat
QR Cute Scan
Pushme.to
RMV
Shazam
Skype
SoundHound
Speed Test
Songify
TeamViewer
Translate
TuneIn Radio
TV Movie
Twitter
USB Disk
VZ-Netzwerke
WaterLevel
WebCamera
Yallakora
yuilop


0180-tel
appgefahren
Birthdays
DateControl
Eurosport Arabia
google
IMDB
MensaDA
Mitfahrgelegenheit.de
n-tv
N24
Photoshare
Pulse News
SPB TV
Sportschau
SPON
SWOODOO
tagesschau
Zattoo Live TV

DoodleCam
Spray Can
Viber

Führerschein
Prüfungstrainer
Super Fahrschule

Paid AppStore Apps:

1Password
Akinator
Banner
CSSCheatSet
DartCalc
Duden
eWifi
FlightTrack
FriendSync
FrontView
GoodReader
iPray Pro
IP Scanner
iQuran Pro
iSSH
JAM! (Joomla Admin Mobile)
Justin.tv
   Labyrinth
Maven
NAVIGON
NAVV Egypt
NewsRack
nPing
PONS
Print to PDF
PushGmail
Redlaser
Reeder
ReelDirector
Remote VNC
Scanner Pro
Scany
Speed Test
Sprachkurs (Spanisch)
TomTom W.Europe
WhatsApp
WunderRadio

Backgammon
Bild
Byline
CoolIris
Duden
FreeMemory
iTeleport
MakeApps
mBox Mail
PangeaVR
Panorama
 Telefonbuch

Settings:

Google Contacts and Calendar with Push Support
Google Mail Manually Fetch

Choose Google Calendars to Sync: (open from iPhone)
https://m.google.com/sync/settings/iconfig/

Wifi
VPN
Safari Bookmarks
Mail
Calendar

Enable Tethering : (open from iPhone)

http://help.benm.at/tethering.php

Important Paths to Backup:

/private/var/mobile/Library/Preferences App Settings 1
/private/var/mobile/Library/Preferences/TimeCapsule/ Chronus App BackUp Settings
/private/var/mobile/Library/SMS/ SMS
/private/var/mobile/Library/Safari Safari Bookmarks
/private/var/mobile/Library/Notes/ Notes
/private/var/mobile/Library/CallHistory/ Call History
/private/var/mobile/Library/Chronus
/private/var/mobile/Media/
/private/var/mobile/Documents

/private/var/stash/Applications/
/private/var/preferences

/private/etc/apt/sources.list.d Cydia Sources

/Library/Preferences/SystemConfiguration/ Saved Wireless Keys
/Library/Wallpaper/ WallPapers


/var/mobile/Media/iTunes_Control/Ringtones/ Ring Tones
(/System/Library/PrivateFrameworks/MobileInstallation.framework IPA)

/User/Media/MxTube/
/User/Media/Videos/
/var/mobile/Media/DCIM/ Pics
/User/Media/iPhoneVideoRecorder/

BackUp on Windows

91 Mobile Assistant

Useful Commands

create folder junctions: browse to the desired path then use: ln -s "/User/Documents/Quran[Source]" "Quran[Target]"

To remove use rm command

for iBluetooth, I used this path: "/User/Media/Downloads"

for Mplayer I made a symblic link by: ln -s "/User/Media/Downloads" "/private/var/media"

Change iPhone root and mobile Password

passwd root
passwd mobile 

Reset iPhone root and mobile Password

http://www.gargan.org/en/iPhone_iPod_touch/Reset_your_root_password/

This is easy. just ssh on your iPhone using the user 'mobile' (w/ default password 'alpine').

then create a symlink (because iCommander is pretty buggy):

ln -s /private/etc/master.passwd master.passwd

Afterwards - on your iPhone - start iCommander - your will see a عنوان البريد الإلكتروني هذا محمي من روبوتات السبام. يجب عليك تفعيل الجافاسكربت لرؤيته.' file click on the the little blue error to the right and in Permissions type in '666' and press 'Set'.

back in the terminal you can now edit the master.passwd ('nano master.passwd') and change it.

Set the password of root to: /smx7MYTQIi2M (whole line should be something like:
root:/smx7MYTQIi2M:0:0::0:0:System Administrator:/var/root:/bin/sh
Then close it via Ctrl-X and then to save it.

Now you can login with root/alpine again :)